Get started
Install Honeychrome and learn your way around.
Unmixing
Build a spectral model, clean controls and remove autofluorescence.
Plots and gating
Plots, transforms, gates and per-sample gates.
Statistics
Compare samples and groups of samples.
Outputs
Write reports and export plots and FCS files.
Acquisition
Run a Cytkit cytometer from Honeychrome.
Reference
Long jobs, privacy and other details.
Developers
Extend Honeychrome with Python plugins.
Every page of the app also has a Show Help button that explains each setting on that page, with references.